HPC Tutorials

• HPC Grid Tutorial: How to create a Conda environment

  This knowledge articles goes over the steps to create and activate a Conda environment.

• HPC Grid Tutorial: How to Apply for a Grid Account

  This tutorial shows how to apply for an account on the grid.

• HPC Grid Tutorial: How to Check Disk Quota

  This tutorial will demonstrate how to check your disk quota.

• HPC Grid Tutorial: How to modify environmental variables

  This tutorial shows how to modify environmental variables in the bash shell.

• HPC Grid Tutorial: How to Run an MPI Job

  This tutorial demonstrates how to run an MPI Job.

• HPC Grid Tutorial: How to Run a Converge Job

  This tutorial will demonstrate how to run a converge job.

• HPC Grid Tutorial: How to Setup PuTTY for the Grid

  This tutorial will show you how to setup PuTTY software and connect to the Grid.

• HPC Grid Tutorial: How to compile with C/C++

  This tutorial will demonstrate how to compile a program with C/C++.

• HPC Grid Tutorial: How to compile with Fortran

  This tutorial will demonstrate how to compile a program with a Fortran compiler.

• HPC Grid Tutorial: How to Run MATLAB

  This tutorial demonstrates how to run MATLAB on the Grid.

• HPC Grid Tutorial: How to Utilize Features and Constraints

  This tutorial demonstrates how to utilize features of nodes using the constraint directive.

• HPC Grid Tutorial: How to Run a Multicore Job

  This tutorial demonstrates how to run a multicore job.

• HPC Grid Tutorial: How to Run a NAMD Job

  This tutorial shows how to run a NAMD job.

• HPC Grid Tutorial: How to Use Vim

  This tutorial demonstrates how to use the Vim text editor.

• HPC Grid Tutorial: How to Run R

  This tutorial demonstrates how to run R on the Grid.

• HPC Grid Tutorial: How to Retrieve Files from the pNFS Snapshot

  This tutorial demonstrates how to recover files using your pNFS snapshot.

• HPC Grid Tutorial: How to Run X11

  This tutorial demonstrates how to run X11 on the Grid.

• HPC Grid Tutorial: How to Use SAMtools

  This tutorial demonstrates how to use the module SAMtools

• HPC Grid Tutorial: How to Setup PSFTP

  This tutorial demonstrates how to setup PSFTP for the Grid.

• HPC Grid Tutorial: How to Setup WinSCP

  This tutorial demonstrates how to setup WinSCP and connect to the Grid.

• HPC Grid Tutorial: How to Run a Job for Tensorflow

  This tutorial demonstrates how to run a Tensorflow job.

• HPC Grid Tutorial: How to prepare to develop and compile code for the NVIDIA Tesla

  This tutorial demonstrates how to prepare to develop and compile code for the NVIDIA Tesla graphic processing unites.

• HPC Grid Tutorial: How to Edit Text Using Nano Text Editor

  This tutorial demonstrates how to use nano text editor.

• HPC Grid Tutorial: How to Run a GPU Job

  This tutorial demonstrates how to run a GPU job on the Grid.

• HPC Grid Tutorial: How to Run Xming

  This tutorial demonstrates how to install and run Xming on the Grid.

• HPC Grid Tutorial: How to Load Modules

  This tutorial demonstrates how to load modules on the Grid.

• HPC Grid Tutorial: How to Setup Globus

  This tutorial demonstrates how to setup Globus for the Grid.

• HPC Grid Tutorial: How to Use OpenSSH to Connect to the Grid

  This tutorial demonstrates how to connect to the Grid using OpenSSH.

• HPC Grid Tutorial: How to Run STATA

  This tutorial demonstrates how to run STATA on the Grid.

• HPC Grid Knowledge: Storage solutions

  This knowledge article gives the various Storage Solutions offered on the Grid.

• HPC Grid Tutorial: How to Connect to the Grid Using Bitvise

  This tutorial demonstrates how to setup Bitvise and connect to the Grid.

• HPC Grid Tutorial: How to Use FileZilla

  This tutorial demonstrates how to use FileZilla

• HPC Grid Tutorial: How to Run Jupyter Notebook OnDemand

  This tutorial shows how to run Jupyter Notebook through OnDemand.

• HPC Grid Tutorial: How to Manage Your Files OnDemand

  This tutorial shows how to use the file manager OnDemand to edit, upload, download and transfer files.

• HPC Grid Tutorial: Getting Started with Open Science Grid (OSG)

  This knowledge article gives an overview of what OSG is and how to get started using it.

• HPC Grid Tutorial: How to Run a LS-DYNA Job

  This tutorial shows how to run a job for LS-DYNA.

• HPC Grid Tutorial: Getting Started with XSEDE

  This knowledge article gives some basic information on what XSEDE is and how to get started with it.

• How to Compile Using Intel's Open Fabrics

  Compiling with Intel's Open Fabrics 1. The Grid has a default compiler module loaded, and only one compiler module can be loaded at a time. You will need to unload the Grid's default module using the following command: ml unload grid-default2. Load t...

• HPC Grid Tutorial: How to Run a Gaussian Job

  This tutorial shows you how to run a job for Gaussian.

• HPC Grid Tutorial: How to Connect to the Grid OnDemand

  This tutorial demonstrates how to connect to the Grid OnDemand.

• HPC Grid Tutorial: How to Generate and Use SSH Keys with PuTTY

  This tutorial demonstrates how to create and use SSH keys with PuTTY to access the Grid.

• HPC Grid Tutorial: How to Run Matlab OnDemand

  This knowledge article outlines the steps to run Matlab OnDemand.

• HPC Grid Tutorial: How to Create a Conda Environment for Jupyter Notebook OnDemand

  This knowledge article shows how to create a conda environment for jupyter notebook ondemand.

• How do I SSH to the Grid on macOS?

  This knowledge article goes over how to SSH to the Grid on Mac using the Terminal.

• How do I run XQuartz on macOS?

  This knowledge article goes over how to run the X server software XQuartz on Mac

• HPC Grid Tutorial: How to Run Pyspark with Jupyter Notebook OnDemand

  This tutorial shows you how to run Pyspark with Jupyter Notebook OnDemand.

• HPC Grid Tutorial: How to Run and Monitor Jobs for Slurm

  This article gives a basic slurm batch script that you can use as a base for your own job scripts. It also goes over commands for monitoring and controlling jobs.

• HPC Grid Tutorial: How to Run an Interactive Job

  This knowledge article shows how to begin an interactive job or shell.

• HPC Grid Tutorial: Introduction to Slurm

  This knowledge article will give an overview of Slurm, new job submission requirements as well as commands and examples, and PBS to Slurm equivalents to convert jobscripts.

• HPC Grid Knowledge: Why Walltimes are Important

  This knowledge article outlines the importance of the walltime requirement.